STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000004441Lysine (K)-specific demethylase 6A, like. (1379 aa)    
Predicted Functional Partners:
ENSAPEP00000006314
Baculoviral IAP repeat containing 6.
   
 0.989
ENSAPEP00000011520
ATP synthase F1 subunit delta.
  
 0.989
ENSAPEP00000024585
ATP synthase subunit gamma.
  
 0.986
ENSAPEP00000025551
ATP synthase peripheral stalk subunit OSCP.
  
 0.986
ENSAPEP00000010384
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.981
ENSAPEP00000031691
Retinoblastoma binding protein 5.
    
 0.981
ENSAPEP00000009945
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.971
ENSAPEP00000028990
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.971
ENSAPEP00000011360
Embryonic ectoderm development.
   
 0.961
ENSAPEP00000029595
ATP synthase peripheral stalk-membrane subunit b.
   
 0.959
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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