STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000004587Pleckstrin homology domain containing, family F (with FYVE domain) member 2. (246 aa)    
Predicted Functional Partners:
ENSAPEP00000016946
Mitochondrial calcium uptake 2.
   
 0.666
ENSAPEP00000022024
Mitochondrial calcium uptake 1.
   
 0.666
ENSAPEP00000032177
Single-pass membrane protein with aspartate-rich tail 1b.
     
 0.649
ENSAPEP00000007513
RAB4a, member RAS oncogene family.
    
  0.597
RAB4A
RAB4A, member RAS oncogene family.
    
  0.597
ENSAPEP00000015656
RAB4B, member RAS oncogene family.
    
  0.597
ENSAPEP00000004528
Sorting nexin 29.
    
 
 0.584
ENSAPEP00000005801
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.570
ENSAPEP00000004799
Prohibitin.
    
  0.567
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
     
 0.539
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.