STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000004731Dynein, cytoplasmic 2, light intermediate chain 1. (360 aa)    
Predicted Functional Partners:
ENSAPEP00000021825
WD repeat domain 60.
    
 0.997
ENSAPEP00000017472
WD repeat domain 34.
    
 0.990
ENSAPEP00000006817
Robl_LC7 domain-containing protein.
    
 0.977
ENSAPEP00000032337
Dynein light chain roadblock.
    
 0.977
ENSAPEP00000023968
Dynein, cytoplasmic 1, intermediate chain 2b.
    
 0.954
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
    
 0.954
DYNC1I2
Dynein cytoplasmic 1 intermediate chain 2.
    
 0.954
ENSAPEP00000030217
Dynein, cytoplasmic 1, intermediate chain 2a.
    
 0.954
ENSAPEP00000003246
Tctex1 domain containing 2.
   
 0.943
DYNLL2
Dynein light chain.
    
 0.937
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.