ENSAPEP00000005536 protein (Amphiprion percula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSAPEP00000005536

Adenosine deaminase tRNA specific 3. (348 aa)

Predicted Functional Partners:

ENSAPEP00000019933

0.992

ENSAPEP00000014338

0.981

ENSAPEP00000020943

0.901

ENSAPEP00000024210

0.886

CTU1

0.870

ENSAPEP00000020260

0.854

ENSAPEP00000018835

0.828

ENSAPEP00000001682

0.805

ENSAPEP00000022029

0.795

AMDHD1

0.795

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMDHD1	CTU1	ENSAPEP00000030975	ENSAPEP00000009296	Amidohydrolase domain containing 1.	Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.	0.786
AMDHD1	ENSAPEP00000005536	ENSAPEP00000030975	ENSAPEP00000005536	Amidohydrolase domain containing 1.	Adenosine deaminase tRNA specific 3.	0.795
AMDHD1	ENSAPEP00000014338	ENSAPEP00000030975	ENSAPEP00000014338	Amidohydrolase domain containing 1.	Single-strand-selective monofunctional uracil-DNA glycosylase 1.	0.795
AMDHD1	ENSAPEP00000018835	ENSAPEP00000030975	ENSAPEP00000018835	Amidohydrolase domain containing 1.	NDUFA4 mitochondrial complex associated like 2a.	0.786
AMDHD1	ENSAPEP00000019933	ENSAPEP00000030975	ENSAPEP00000019933	Amidohydrolase domain containing 1.	CMP/dCMP-type deaminase domain-containing protein.	0.795
AMDHD1	ENSAPEP00000020260	ENSAPEP00000030975	ENSAPEP00000020260	Amidohydrolase domain containing 1.	Thymidine kinase.	0.558
AMDHD1	ENSAPEP00000020943	ENSAPEP00000030975	ENSAPEP00000020943	Amidohydrolase domain containing 1.	Thymidylate synthetase.	0.410
AMDHD1	ENSAPEP00000024210	ENSAPEP00000030975	ENSAPEP00000024210	Amidohydrolase domain containing 1.	Uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae).	0.931
CTU1	AMDHD1	ENSAPEP00000009296	ENSAPEP00000030975	Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.	Amidohydrolase domain containing 1.	0.786
CTU1	ENSAPEP00000005536	ENSAPEP00000009296	ENSAPEP00000005536	Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.	Adenosine deaminase tRNA specific 3.	0.870
CTU1	ENSAPEP00000014338	ENSAPEP00000009296	ENSAPEP00000014338	Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.	Single-strand-selective monofunctional uracil-DNA glycosylase 1.	0.815
CTU1	ENSAPEP00000019933	ENSAPEP00000009296	ENSAPEP00000019933	Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.	CMP/dCMP-type deaminase domain-containing protein.	0.822
CTU1	ENSAPEP00000020943	ENSAPEP00000009296	ENSAPEP00000020943	Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.	Thymidylate synthetase.	0.499
CTU1	ENSAPEP00000022029	ENSAPEP00000009296	ENSAPEP00000022029	Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.	Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.	0.786
CTU1	ENSAPEP00000024210	ENSAPEP00000009296	ENSAPEP00000024210	Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.	Uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae).	0.735
ENSAPEP00000001682	ENSAPEP00000005536	ENSAPEP00000001682	ENSAPEP00000005536	Alcohol dehydrogenase iron containing 1.	Adenosine deaminase tRNA specific 3.	0.805
ENSAPEP00000001682	ENSAPEP00000014338	ENSAPEP00000001682	ENSAPEP00000014338	Alcohol dehydrogenase iron containing 1.	Single-strand-selective monofunctional uracil-DNA glycosylase 1.	0.805
ENSAPEP00000001682	ENSAPEP00000019933	ENSAPEP00000001682	ENSAPEP00000019933	Alcohol dehydrogenase iron containing 1.	CMP/dCMP-type deaminase domain-containing protein.	0.805
ENSAPEP00000005536	AMDHD1	ENSAPEP00000005536	ENSAPEP00000030975	Adenosine deaminase tRNA specific 3.	Amidohydrolase domain containing 1.	0.795
ENSAPEP00000005536	CTU1	ENSAPEP00000005536	ENSAPEP00000009296	Adenosine deaminase tRNA specific 3.	Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.	0.870