STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000006007TBC1 domain family, member 4. (1246 aa)    
Predicted Functional Partners:
ENSAPEP00000019952
RAB14, member RAS oncogene family.
    
 0.854
ENSAPEP00000031280
Uncharacterized protein.
    
 0.854
ENSAPEP00000014441
RAB2A, member RAS oncogene family.
    
 0.852
ENSAPEP00000018254
Non-specific serine/threonine protein kinase.
     
 0.778
ENSAPEP00000032353
Non-specific serine/threonine protein kinase.
     
 0.778
ENSAPEP00000000102
RAB11a, member RAS oncogene family.
    
 0.698
ENSAPEP00000012896
RAB11B, member RAS oncogene family, a.
    
 0.698
ENSAPEP00000012966
Uncharacterized protein.
    
 0.698
ENSAPEP00000012993
Uncharacterized protein.
    
 0.698
ENSAPEP00000023314
Uncharacterized protein.
    
 0.698
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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