STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC39Coiled-coil domain containing 39. (775 aa)    
Predicted Functional Partners:
ENSAPEP00000005098
Malate synthase-like.
   
 
 0.873
IFT122
Intraflagellar transport 122.
   
 
 0.850
ENSAPEP00000007649
Dynein, axonemal, light intermediate chain 1.
    
 
 0.703
ENSAPEP00000021348
Coiled-coil domain containing 40.
    
 
 0.697
ENSAPEP00000007400
Armadillo repeat containing 4.
   
 
 0.694
ENSAPEP00000029898
Radial spoke head component 4A.
   
 
 0.688
ENSAPEP00000021897
Extra spindle pole bodies like 1, separase.
    
 0.675
CCNO
Cyclin O; Belongs to the cyclin family.
    
 0.657
ENSAPEP00000007095
Cytoskeleton associated protein 5.
    
 
 0.652
ENSAPEP00000004479
Leucine rich repeat containing 6.
   
 
 0.649
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.