STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000006507T-box transcription factor Ta. (421 aa)    
Predicted Functional Partners:
ENSAPEP00000007347
Notochord homeobox.
    
 0.787
ENSAPEP00000009378
POU domain protein.
   
 0.747
ENSAPEP00000032930
Forkhead box H1.
   
 
 0.692
ENSAPEP00000006897
Mix paired-like homeobox.
   
 
 0.666
ENSAPEP00000022033
Bone morphogenetic protein 4.
     
 0.666
ENSAPEP00000004563
GATA binding protein 4.
   
 0.661
ENSAPEP00000000531
GATA binding protein 2a.
   
 0.655
GATA2
GATA binding protein 2.
   
 0.655
ENSAPEP00000024542
GATA binding protein 3.
   
 0.655
ENSAPEP00000004120
Snail family zinc finger 2.
    
 0.643
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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