STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000007064DUF4939 domain-containing protein. (144 aa)    
Predicted Functional Partners:
ENSAPEP00000025796
Helicase ATP-binding domain-containing protein.
    
  0.877
ENSAPEP00000025882
ERCC4 domain-containing protein.
    
  0.877
ENSAPEP00000003518
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
   
 
 0.738
ENSAPEP00000006836
Lin-9 DREAM MuvB core complex component.
    
 0.649
ENSAPEP00000015956
Lin-52 DREAM MuvB core complex component.
    
 0.646
ENSAPEP00000018448
CENP-T_C domain-containing protein.
    
  0.550
ENSAPEP00000012151
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.541
RPA1
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.541
ENSAPEP00000007320
FA complementation group C.
    
  0.539
ENSAPEP00000011003
FA complementation group L.
    
  0.539
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.