STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000007380Solute carrier family 7 member 6 opposite strand. (331 aa)    
Predicted Functional Partners:
ENSAPEP00000010048
Polymerase (RNA) II (DNA directed) polypeptide C.
    
 
 0.948
POLR2E
RNA polymerase II subunit E.
   
 
 0.930
ENSAPEP00000007193
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.916
ENSAPEP00000030593
Polymerase (RNA) II (DNA directed) polypeptide J.
    
 
 0.914
ENSAPEP00000026331
Polymerase (RNA) II (DNA directed) polypeptide D.
    
 
 0.912
ENSAPEP00000030598
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 
 0.910
ENSAPEP00000015753
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
 
 0.863
ENSAPEP00000021515
Polymerase (RNA) II (DNA directed) polypeptide L.
    
 
 0.842
ENSAPEP00000003380
RNA polymerase I and III subunit C.
    
 
 0.834
ENSAPEP00000018197
Polymerase (RNA) II (DNA directed) polypeptide F.
    
 
 0.769
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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