STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000010091Pseudouridine synthase 7. (637 aa)    
Predicted Functional Partners:
ENSAPEP00000012379
Nucleolar complex protein 3 homolog.
   
   0.965
ENSAPEP00000004555
Large 60S subunit nuclear export GTPase 1.
   
   0.921
ENSAPEP00000018326
Mitochondrial ribosomal protein L15.
   
   0.918
ENSAPEP00000013213
Mitochondrial rRNA methyltransferase 3a.
   
   0.914
ENSAPEP00000027594
Mitochondrial ribosomal protein L13.
   
   0.912
ENSAPEP00000024183
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
   0.910
MRPL21
Mitochondrial ribosomal protein L21.
  
   0.909
ENSAPEP00000013053
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
   0.909
ENSAPEP00000003732
Mitochondrial ribosomal protein L43.
   
   0.901
ENSAPEP00000010395
GTP binding protein 3, mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
   
   0.900
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.