ENSAPEP00000010168 protein (Amphiprion percula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSAPEP00000010168

IGv domain-containing protein. (114 aa)

Predicted Functional Partners:

ENSAPEP00000003098

0.968

ENSAPEP00000013651

0.861

ENSAPEP00000003071

0.834

ENSAPEP00000003086

0.834

ENSAPEP00000024386

0.834

ENSAPEP00000029071

0.834

ENSAPEP00000032856

0.834

ENSAPEP00000033652

0.834

ENSAPEP00000033712

0.834

ENSAPEP00000011049

0.831

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSAPEP00000003071	ENSAPEP00000003098	IGc1 domain-containing protein.	Ig-like domain-containing protein.	0.952
ENSAPEP00000003071	ENSAPEP00000010168	IGc1 domain-containing protein.	IGv domain-containing protein.	0.834
ENSAPEP00000003086	ENSAPEP00000003098	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.974
ENSAPEP00000003086	ENSAPEP00000010168	Ig-like domain-containing protein.	IGv domain-containing protein.	0.834
ENSAPEP00000003086	ENSAPEP00000032856	Ig-like domain-containing protein.	MHC_II_beta domain-containing protein.	0.485
ENSAPEP00000003086	ENSAPEP00000033652	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.400
ENSAPEP00000003098	ENSAPEP00000003071	Ig-like domain-containing protein.	IGc1 domain-containing protein.	0.952
ENSAPEP00000003098	ENSAPEP00000003086	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.974
ENSAPEP00000003098	ENSAPEP00000010168	Ig-like domain-containing protein.	IGv domain-containing protein.	0.968
ENSAPEP00000003098	ENSAPEP00000024386	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.957
ENSAPEP00000003098	ENSAPEP00000029071	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.970
ENSAPEP00000003098	ENSAPEP00000032856	Ig-like domain-containing protein.	MHC_II_beta domain-containing protein.	0.968
ENSAPEP00000003098	ENSAPEP00000033652	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.971
ENSAPEP00000003098	ENSAPEP00000033712	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.971
ENSAPEP00000010168	ENSAPEP00000003071	IGv domain-containing protein.	IGc1 domain-containing protein.	0.834
ENSAPEP00000010168	ENSAPEP00000003086	IGv domain-containing protein.	Ig-like domain-containing protein.	0.834
ENSAPEP00000010168	ENSAPEP00000003098	IGv domain-containing protein.	Ig-like domain-containing protein.	0.968
ENSAPEP00000010168	ENSAPEP00000011049	IGv domain-containing protein.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	0.831
ENSAPEP00000010168	ENSAPEP00000013651	IGv domain-containing protein.	Major histocompatibility complex class I ZKA; Belongs to the MHC class I family.	0.861
ENSAPEP00000010168	ENSAPEP00000024386	IGv domain-containing protein.	Ig-like domain-containing protein.	0.834