STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000010707AlkB homolog 7. (230 aa)    
Predicted Functional Partners:
ENSAPEP00000010368
NADH:ubiquinone oxidoreductase subunit B7.
   
    0.794
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
  
 0.769
ENSAPEP00000013668
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.738
ENSAPEP00000016465
Afadin, adherens junction formation factor a.
    
  0.688
ENSAPEP00000006379
Synovial sarcoma, X breakpoint 2 interacting protein b.
 
   
  0.672
ENSAPEP00000034900
Synovial sarcoma, X breakpoint 2 interacting protein a.
 
   
  0.672
ENSAPEP00000005498
AlkB homolog 6.
   
  
 0.608
ENSAPEP00000013635
AlkB homolog 4, lysine demthylase.
   
  
 0.601
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
   
    0.590
ENSAPEP00000028801
Uncharacterized protein.
   
    0.590
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.