STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000012402Sm domain-containing protein. (66 aa)    
Predicted Functional Partners:
ENSAPEP00000021782
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.999
ENSAPEP00000024245
Small nuclear ribonucleoprotein G.
   
 0.999
ENSAPEP00000030538
Small nuclear ribonucleoprotein Sm D2.
   
 0.999
ENSAPEP00000031078
Small nuclear ribonucleoprotein polypeptide F.
   
 0.999
ENSAPEP00000000351
Small nuclear ribonucleoprotein polypeptide A.
   
 0.998
ENSAPEP00000014533
Splicing factor 3b, subunit 4.
    
 0.997
ENSAPEP00000004667
Elongation factor Tu GTP binding domain containing 2.
   
 0.996
ENSAPEP00000020313
Pre-mRNA processing factor 8.
   
 0.996
ENSAPEP00000003931
Splicing factor 3b, subunit 2.
   
 0.995
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.995
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.