STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000014361Calcium binding and coiled-coil domain 1b. (534 aa)    
Predicted Functional Partners:
ENSAPEP00000005098
Malate synthase-like.
   
 
 0.873
ENSAPEP00000021897
Extra spindle pole bodies like 1, separase.
    
 0.675
ENSAPEP00000007095
Cytoskeleton associated protein 5.
    
 
 0.652
ENSAPEP00000031226
P53-induced death domain protein 1.
    
  0.584
ENSAPEP00000007520
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.564
ENSAPEP00000018022
Protein kinase domain-containing protein.
    
 0.563
ENSAPEP00000023062
Receptor-interacting serine-threonine kinase 4.
    
 0.563
ENSAPEP00000014104
UEV and lactate/malate dehyrogenase domains.
   
 0.562
ENSAPEP00000024408
Malate dehydrogenase.
   
 
 0.554
ENSAPEP00000029144
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.539
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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