STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000015821Pre-mRNA processing factor 4Bb. (1017 aa)    
Predicted Functional Partners:
ENSAPEP00000011726
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
    
 
 0.966
ENSAPEP00000003534
Pinin, desmosome associated protein.
   
 0.958
ENSAPEP00000004667
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.954
ENSAPEP00000011249
PRP31 pre-mRNA processing factor 31 homolog (yeast).
    
 
 0.952
ENSAPEP00000020313
Pre-mRNA processing factor 8.
    
 
 0.948
TCERG1
Transcription elongation regulator 1.
   
 0.945
ENSAPEP00000001010
PRP4 pre-mRNA processing factor 4 homolog (yeast).
    
 
 0.933
ENSAPEP00000023685
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23.
   
 0.932
ENSAPEP00000003746
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 
 0.931
ENSAPEP00000010572
RNA binding motif protein 25a.
   
  0.923
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.