STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000019476RRM domain-containing protein. (461 aa)    
Predicted Functional Partners:
ENSAPEP00000017108
RNA binding motif protein 24a.
  
 
 0.752
RBM38
RNA binding motif protein 38.
  
 
 0.749
ENSAPEP00000018405
RRM domain-containing protein.
  
 
 0.747
RBPMS
RNA binding protein, mRNA processing factor.
   
 
 0.724
ENSAPEP00000011532
QKI, KH domain containing, RNA binding 2.
   
 
 0.711
ENSAPEP00000024704
QKI, KH domain containing, RNA binding a.
   
 
 0.711
ENSAPEP00000014102
RNA binding motif protein 24b.
  
 
0.700
ENSAPEP00000002334
RNA binding protein, mRNA processing factor 2b.
   
 0.661
ENSAPEP00000033846
Methyl CpG binding protein 2.
     
 0.603
ENSAPEP00000023566
G patch domain containing 8.
    
 0.598
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.