Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APP | ENSAPEP00000007057 | ENSAPEP00000004899 | ENSAPEP00000007057 | Amyloid beta precursor protein. | Tissue factor pathway inhibitor. | 0.653 |
APP | ENSAPEP00000009886 | ENSAPEP00000004899 | ENSAPEP00000009886 | Amyloid beta precursor protein. | Alpha-1-microglobulin/bikunin precursor. | 0.622 |
APP | ENSAPEP00000022142 | ENSAPEP00000004899 | ENSAPEP00000022142 | Amyloid beta precursor protein. | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | 0.723 |
APP | HGFAC | ENSAPEP00000004899 | ENSAPEP00000020089 | Amyloid beta precursor protein. | HGF activator. | 0.628 |
ENSAPEP00000001923 | ENSAPEP00000007057 | ENSAPEP00000001923 | ENSAPEP00000007057 | Amyloid beta (A4) precursor protein b. | Tissue factor pathway inhibitor. | 0.653 |
ENSAPEP00000001923 | ENSAPEP00000009886 | ENSAPEP00000001923 | ENSAPEP00000009886 | Amyloid beta (A4) precursor protein b. | Alpha-1-microglobulin/bikunin precursor. | 0.633 |
ENSAPEP00000001923 | ENSAPEP00000022142 | ENSAPEP00000001923 | ENSAPEP00000022142 | Amyloid beta (A4) precursor protein b. | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | 0.723 |
ENSAPEP00000001923 | HGFAC | ENSAPEP00000001923 | ENSAPEP00000020089 | Amyloid beta (A4) precursor protein b. | HGF activator. | 0.648 |
ENSAPEP00000007057 | APP | ENSAPEP00000007057 | ENSAPEP00000004899 | Tissue factor pathway inhibitor. | Amyloid beta precursor protein. | 0.653 |
ENSAPEP00000007057 | ENSAPEP00000001923 | ENSAPEP00000007057 | ENSAPEP00000001923 | Tissue factor pathway inhibitor. | Amyloid beta (A4) precursor protein b. | 0.653 |
ENSAPEP00000007057 | ENSAPEP00000022142 | ENSAPEP00000007057 | ENSAPEP00000022142 | Tissue factor pathway inhibitor. | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | 0.848 |
ENSAPEP00000007057 | HGFAC | ENSAPEP00000007057 | ENSAPEP00000020089 | Tissue factor pathway inhibitor. | HGF activator. | 0.680 |
ENSAPEP00000009886 | APP | ENSAPEP00000009886 | ENSAPEP00000004899 | Alpha-1-microglobulin/bikunin precursor. | Amyloid beta precursor protein. | 0.622 |
ENSAPEP00000009886 | ENSAPEP00000001923 | ENSAPEP00000009886 | ENSAPEP00000001923 | Alpha-1-microglobulin/bikunin precursor. | Amyloid beta (A4) precursor protein b. | 0.633 |
ENSAPEP00000009886 | ENSAPEP00000022142 | ENSAPEP00000009886 | ENSAPEP00000022142 | Alpha-1-microglobulin/bikunin precursor. | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | 0.720 |
ENSAPEP00000009886 | HGFAC | ENSAPEP00000009886 | ENSAPEP00000020089 | Alpha-1-microglobulin/bikunin precursor. | HGF activator. | 0.645 |
ENSAPEP00000016320 | ENSAPEP00000018852 | ENSAPEP00000016320 | ENSAPEP00000018852 | Macrophage stimulating 1 receptor a. | MET proto-oncogene, receptor tyrosine kinase. | 0.852 |
ENSAPEP00000016320 | ENSAPEP00000022142 | ENSAPEP00000016320 | ENSAPEP00000022142 | Macrophage stimulating 1 receptor a. | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | 0.816 |
ENSAPEP00000016320 | ENSAPEP00000032456 | ENSAPEP00000016320 | ENSAPEP00000032456 | Macrophage stimulating 1 receptor a. | Macrophage stimulating 1 receptor b. | 0.855 |
ENSAPEP00000016320 | HGFAC | ENSAPEP00000016320 | ENSAPEP00000020089 | Macrophage stimulating 1 receptor a. | HGF activator. | 0.960 |
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