STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000023801NOP10 ribonucleoprotein homolog (yeast). (64 aa)    
Predicted Functional Partners:
ENSAPEP00000002289
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 0.999
ENSAPEP00000003192
Dyskeratosis congenita 1, dyskerin.
   
 0.999
ENSAPEP00000012286
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
ENSAPEP00000000907
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.994
ENSAPEP00000003184
Ribonuclease P/MRP 38 subunit.
   
 0.993
ENSAPEP00000021312
TruB pseudouridine (psi) synthase family member 1.
   
 0.991
ENSAPEP00000026621
WD repeat containing, antisense to TP53.
    
 0.986
ENSAPEP00000018463
TruB pseudouridine (psi) synthase family member 2.
   
 0.984
ENSAPEP00000012789
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.974
RSRC1
Arginine and serine rich coiled-coil 1.
   
 0.974
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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