STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000024607Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily. (414 aa)    
Predicted Functional Partners:
ENSAPEP00000006009
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
   
 0.962
ENSAPEP00000019120
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
   
 0.962
ENSAPEP00000016643
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
    
 0.941
ENSAPEP00000024078
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.936
ENSAPEP00000011020
Dishevelled segment polarity protein 2.
    
  0.927
ENSAPEP00000023772
Dishevelled segment polarity protein 3a.
    
  0.927
ENSAPEP00000026823
Uncharacterized protein.
    
  0.927
ENSAPEP00000019194
Ribosomal RNA processing 7 homolog A.
   
 0.915
ENSAPEP00000025254
Nucleolar protein 6.
    
 0.902
ENSAPEP00000022191
Uncharacterized protein.
     
 0.899
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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