STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000026613TBC1 domain family, member 5. (920 aa)    
Predicted Functional Partners:
ENSAPEP00000005260
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.969
ENSAPEP00000009517
VPS26, retromer complex component A.
   
 
 0.951
ENSAPEP00000000341
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.942
ENSAPEP00000010175
VPS26, retromer complex component B.
   
 
 0.886
ENSAPEP00000018156
Uncharacterized protein.
   
 
 0.886
ENSAPEP00000008129
Uncharacterized protein.
   
 
 0.753
RAB6B
RAB6B, member RAS oncogene family.
   
 
 0.753
RAB41
RAB41, member RAS oncogene family.
   
 
 0.753
ENSAPEP00000029407
RAB6B, member RAS oncogene family a.
   
 
 0.753
ENSAPEP00000019482
CAP-ZIP_m domain-containing protein.
   
 
 0.603
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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