STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000028071LRRCT domain-containing protein. (709 aa)    
Predicted Functional Partners:
ENSAPEP00000020312
Glycoprotein IX (platelet).
   
 0.987
ENSAPEP00000024736
LRRNT domain-containing protein.
   
 0.975
ENSAPEP00000000233
Otogelin.
    
 0.937
ENSAPEP00000004255
Subcommissural organ spondin.
    
 0.937
ENSAPEP00000021373
Otogelin-like.
    
 0.937
ENSAPEP00000021911
Von Willebrand factor.
    
 0.937
ENSAPEP00000000344
Uncharacterized protein.
    
 0.892
ENSAPEP00000031904
Uncharacterized protein.
    
 0.892
ENSAPEP00000032026
Uncharacterized protein.
    
 0.892
ENSAPEP00000028168
Nucleoporin 42.
    
 0.884
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.