STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000029050Polymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family. (569 aa)    
Predicted Functional Partners:
ENSAPEP00000005648
X-ray repair complementing defective repair in Chinese hamster cells 1.
   
 0.974
ENSAPEP00000025048
DNA ligase.
  
 0.912
ENSAPEP00000027190
DNA ligase.
  
 0.906
ENSAPEP00000034316
Polynucleotide kinase 3'-phosphatase.
    
 0.904
ENSAPEP00000012478
Si:ch1073-75f15.2.
    
 0.894
ENSAPEP00000030199
DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.
    
 0.880
ENSAPEP00000025333
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.878
ENSAPEP00000014486
DNA ligase.
  
 0.874
ENSAPEP00000029147
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 0.868
ENSAPEP00000027843
DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae).
    
 0.853
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.