STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000029786Family with sequence similarity 50 member A. (333 aa)    
Predicted Functional Partners:
ENSAPEP00000025408
SLU7 homolog, splicing factor.
   
 
  0.902
ENSAPEP00000020442
Aly/REF export factor.
   
  0.896
ENSAPEP00000007783
NFKB activating protein.
   
 
  0.886
ENSAPEP00000032957
Family with sequence similarity 32 member A.
    
  0.885
ENSAPEP00000003698
CWC22 spliceosome associated protein homolog.
    
  0.880
ENSAPEP00000007915
Cell division cycle 40 homolog (S. cerevisiae).
   
 
  0.876
ENSAPEP00000021635
PRKR interacting protein 1.
   
 
  0.869
DDX41
DEAD-box helicase 41.
   
 
  0.810
ENSAPEP00000022500
SDE2 telomere maintenance homolog (S. pombe).
     
 0.809
C9orf78
Chromosome 9 open reading frame 78.
    
  0.801
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.