STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000030173RALY RNA binding protein like. (156 aa)    
Predicted Functional Partners:
ENSAPEP00000033000
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.805
ENSAPEP00000002005
RRM domain-containing protein.
   
 
0.788
ENSAPEP00000028128
RRM domain-containing protein.
   
 
0.788
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.785
ENSAPEP00000005922
Heterogeneous nuclear ribonucleoprotein M.
   
 0.770
ENSAPEP00000024245
Small nuclear ribonucleoprotein G.
   
 0.751
ENSAPEP00000021782
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.743
ENSAPEP00000031078
Small nuclear ribonucleoprotein polypeptide F.
   
 0.741
ENSAPEP00000003931
Splicing factor 3b, subunit 2.
   
 0.739
ENSAPEP00000030538
Small nuclear ribonucleoprotein Sm D2.
   
 0.728
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.