STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000031939PYM homolog 1, exon junction complex associated factor. (210 aa)    
Predicted Functional Partners:
ENSAPEP00000032171
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 0.999
ENSAPEP00000032945
Mago homolog, exon junction complex subunit.
    
 
 0.990
ENSAPEP00000034654
V-set immunoregulatory receptor.
   
    0.796
ENSAPEP00000026294
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
    
 
 0.717
ENSAPEP00000005288
Reticulon 4 interacting protein 1.
    
   0.628
ENSAPEP00000029802
PKS_ER domain-containing protein.
    
   0.628
ENSAPEP00000004881
UPF3A regulator of nonsense mediated mRNA decay.
    
 
 0.571
ENSAPEP00000007724
UPF3B regulator of nonsense mediated mRNA decay.
    
 
 0.571
ENSAPEP00000013522
Sulfite oxidase.
      
 0.561
ENSAPEP00000011608
AAR2 splicing factor.
   
  
 0.553
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.