STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBI1ORC ubiquitin ligase 1. (661 aa)    
Predicted Functional Partners:
ENSAPEP00000007455
CCR4-NOT transcription complex, subunit 10.
    
 
 0.728
ENSAPEP00000027140
CCR4-NOT transcription complex, subunit 11.
    
 
 0.719
ENSAPEP00000021539
WD repeat containing, antisense to TP73.
    
   0.619
ENSAPEP00000031589
CCR4-NOT transcription complex, subunit 1.
    
   0.619
ENSAPEP00000027568
Origin recognition complex, subunit 3.
   
 
 0.608
ENSAPEP00000028198
Origin recognition complex, subunit 5.
    
 
 0.534
ENSAPEP00000003918
CCR4-NOT transcription complex, subunit 3b.
    
   0.426
ENSAPEP00000009239
CCR4-NOT transcription complex, subunit 3a.
    
   0.426
ENSAPEP00000016643
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
    
 
 0.420
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.