Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSAPEP00000004562 | ENSAPEP00000032454 | ENSAPEP00000004562 | ENSAPEP00000032454 | Ro60, Y RNA binding protein. | Uncharacterized protein. | 0.506 |
ENSAPEP00000006719 | ENSAPEP00000013011 | ENSAPEP00000006719 | ENSAPEP00000013011 | DEXH (Asp-Glu-X-His) box polypeptide 58. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.711 |
ENSAPEP00000006719 | ENSAPEP00000014448 | ENSAPEP00000006719 | ENSAPEP00000014448 | DEXH (Asp-Glu-X-His) box polypeptide 58. | Ribosomal protein S27a. | 0.891 |
ENSAPEP00000006719 | ENSAPEP00000022154 | ENSAPEP00000006719 | ENSAPEP00000022154 | DEXH (Asp-Glu-X-His) box polypeptide 58. | Ubiquitin-like domain-containing protein. | 0.873 |
ENSAPEP00000006719 | ENSAPEP00000026557 | ENSAPEP00000006719 | ENSAPEP00000026557 | DEXH (Asp-Glu-X-His) box polypeptide 58. | Interferon induced with helicase C domain 1. | 0.984 |
ENSAPEP00000006719 | ENSAPEP00000030755 | ENSAPEP00000006719 | ENSAPEP00000030755 | DEXH (Asp-Glu-X-His) box polypeptide 58. | PYD and CARD domain containing. | 0.405 |
ENSAPEP00000006719 | ENSAPEP00000032454 | ENSAPEP00000006719 | ENSAPEP00000032454 | DEXH (Asp-Glu-X-His) box polypeptide 58. | Uncharacterized protein. | 0.459 |
ENSAPEP00000013011 | ENSAPEP00000006719 | ENSAPEP00000013011 | ENSAPEP00000006719 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | DEXH (Asp-Glu-X-His) box polypeptide 58. | 0.711 |
ENSAPEP00000013011 | ENSAPEP00000014448 | ENSAPEP00000013011 | ENSAPEP00000014448 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Ribosomal protein S27a. | 0.985 |
ENSAPEP00000013011 | ENSAPEP00000022154 | ENSAPEP00000013011 | ENSAPEP00000022154 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin-like domain-containing protein. | 0.977 |
ENSAPEP00000013011 | ENSAPEP00000026557 | ENSAPEP00000013011 | ENSAPEP00000026557 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Interferon induced with helicase C domain 1. | 0.760 |
ENSAPEP00000013011 | ENSAPEP00000028063 | ENSAPEP00000013011 | ENSAPEP00000028063 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Growth arrest-specific 7a. | 0.497 |
ENSAPEP00000013011 | ENSAPEP00000030755 | ENSAPEP00000013011 | ENSAPEP00000030755 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | PYD and CARD domain containing. | 0.427 |
ENSAPEP00000013011 | ENSAPEP00000032454 | ENSAPEP00000013011 | ENSAPEP00000032454 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.493 |
ENSAPEP00000013011 | GAS7 | ENSAPEP00000013011 | ENSAPEP00000024105 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Growth arrest specific 7. | 0.497 |
ENSAPEP00000014448 | ENSAPEP00000006719 | ENSAPEP00000014448 | ENSAPEP00000006719 | Ribosomal protein S27a. | DEXH (Asp-Glu-X-His) box polypeptide 58. | 0.891 |
ENSAPEP00000014448 | ENSAPEP00000013011 | ENSAPEP00000014448 | ENSAPEP00000013011 | Ribosomal protein S27a. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.985 |
ENSAPEP00000014448 | ENSAPEP00000022154 | ENSAPEP00000014448 | ENSAPEP00000022154 | Ribosomal protein S27a. | Ubiquitin-like domain-containing protein. | 0.998 |
ENSAPEP00000014448 | ENSAPEP00000026557 | ENSAPEP00000014448 | ENSAPEP00000026557 | Ribosomal protein S27a. | Interferon induced with helicase C domain 1. | 0.957 |
ENSAPEP00000014448 | ENSAPEP00000028063 | ENSAPEP00000014448 | ENSAPEP00000028063 | Ribosomal protein S27a. | Growth arrest-specific 7a. | 0.889 |
page 1 of 4