Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN26854.1 | KRN28569.1 | IV36_GL001486 | IV36_GL000496 | Adenine-specific DNA methylase. | Methyl-accepting chemotaxis-like protein. | 0.505 |
KRN26854.1 | KRN34209.1 | IV36_GL001486 | IV36_GL000003 | Adenine-specific DNA methylase. | Export protein. | 0.548 |
KRN26854.1 | KRN34273.1 | IV36_GL001486 | IV36_GL000069 | Adenine-specific DNA methylase. | Hypothetical protein. | 0.744 |
KRN26854.1 | recU | IV36_GL001486 | IV36_GL000174 | Adenine-specific DNA methylase. | Holliday junction-specific endonuclease; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.581 |
KRN28569.1 | KRN26854.1 | IV36_GL000496 | IV36_GL001486 | Methyl-accepting chemotaxis-like protein. | Adenine-specific DNA methylase. | 0.505 |
KRN28569.1 | KRN30701.1 | IV36_GL000496 | IV36_GL002062 | Methyl-accepting chemotaxis-like protein. | Hypothetical protein. | 0.503 |
KRN28569.1 | KRN34209.1 | IV36_GL000496 | IV36_GL000003 | Methyl-accepting chemotaxis-like protein. | Export protein. | 0.598 |
KRN28569.1 | KRN34273.1 | IV36_GL000496 | IV36_GL000069 | Methyl-accepting chemotaxis-like protein. | Hypothetical protein. | 0.429 |
KRN28569.1 | rpoE | IV36_GL000496 | IV36_GL001024 | Methyl-accepting chemotaxis-like protein. | DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.590 |
KRN30388.1 | KRN34209.1 | IV36_GL002145 | IV36_GL000003 | Hypothetical protein. | Export protein. | 0.497 |
KRN30388.1 | whiA | IV36_GL002145 | IV36_GL001953 | Hypothetical protein. | Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation. | 0.538 |
KRN30701.1 | KRN28569.1 | IV36_GL002062 | IV36_GL000496 | Hypothetical protein. | Methyl-accepting chemotaxis-like protein. | 0.503 |
KRN30701.1 | KRN34209.1 | IV36_GL002062 | IV36_GL000003 | Hypothetical protein. | Export protein. | 0.581 |
KRN30701.1 | rpoE | IV36_GL002062 | IV36_GL001024 | Hypothetical protein. | DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.653 |
KRN34209.1 | KRN26854.1 | IV36_GL000003 | IV36_GL001486 | Export protein. | Adenine-specific DNA methylase. | 0.548 |
KRN34209.1 | KRN28569.1 | IV36_GL000003 | IV36_GL000496 | Export protein. | Methyl-accepting chemotaxis-like protein. | 0.598 |
KRN34209.1 | KRN30388.1 | IV36_GL000003 | IV36_GL002145 | Export protein. | Hypothetical protein. | 0.497 |
KRN34209.1 | KRN30701.1 | IV36_GL000003 | IV36_GL002062 | Export protein. | Hypothetical protein. | 0.581 |
KRN34209.1 | KRN34210.1 | IV36_GL000003 | IV36_GL000004 | Export protein. | Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | 0.903 |
KRN34209.1 | KRN34273.1 | IV36_GL000003 | IV36_GL000069 | Export protein. | Hypothetical protein. | 0.582 |
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