STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN29976.1ABC transporter, permease. (406 aa)    
Predicted Functional Partners:
KRN29977.1
ABC transporter, ATP-binding protein.
  
 0.982
KRN29975.1
Methyl-accepting chemotaxis sensory transducer.
   
  0.607
KRN29978.1
Malolactic regulator; Belongs to the LysR transcriptional regulatory family.
       0.580
KRN31174.1
CAAX family protease.
 
 
  0.493
KRN29979.1
Malate dehydrogenase.
       0.422
KRN29980.1
Di- and tricarboxylate transporter.
       0.422
KRN34221.1
ABC transporter, ATP-binding protein.
 
 
 0.411
KRN29993.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 
 0.411
KRN28034.1
Multidrug ABC transporter ATPase.
 
 
 0.411
KRN27115.1
Teichoic acid translocation ATP-binding protein.
  
 
 0.411
Your Current Organism:
Lactobacillus mali
NCBI taxonomy Id: 1618
Other names: ATCC 27053, ATCC 27304 [[Lactobacillus yamanashiensis subsp. yamanashiensis]], CCUG 30141, CCUG 32228, CIP 103142, DSM 20444, KCTC 3596, L. mali, LMG 6899, LMG:6899, Lactobacillus yamanashiensis, Lactobacillus yamanashiensis subsp. mali, Lactobacillus yamanashiensis subsp. yamanashiensis, NBRC 102159, NCIB 10560, NCIB:10560, NCIMB 10560, NRRL B-4563
Server load: low (18%) [HD]