STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN30016.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
KRN32062.1
Mandelate racemase muconate lactonizing enzyme, N-terminal domain protein.
 
  
 0.630
KRN28563.1
Gfo Idh MocA family oxidoreductase.
 
 
 0.598
KRN33080.1
FAD FMN-containing dehydrogenase.
 
 
 0.534
KRN30002.1
Hypothetical protein.
   
 
  0.495
KRN27819.1
Isochorismatase.
   
 
  0.495
KRN30236.1
Hypothetical protein.
   
 
  0.495
KRN30690.1
Myo-inositol 2-dehydrogenase.
 
 
 0.491
KRN30689.1
Oxidoreductase, NAD-binding protein.
 
 
 0.483
KRN30691.1
Myo-inositol 2-dehydrogenase.
 
 
 0.481
KRN33180.1
L-iditol 2-dehydrogenase.
  
 
 0.449
Your Current Organism:
Lactobacillus mali
NCBI taxonomy Id: 1618
Other names: ATCC 27053, ATCC 27304 [[Lactobacillus yamanashiensis subsp. yamanashiensis]], CCUG 30141, CCUG 32228, CIP 103142, DSM 20444, KCTC 3596, L. mali, LMG 6899, LMG:6899, Lactobacillus yamanashiensis, Lactobacillus yamanashiensis subsp. mali, Lactobacillus yamanashiensis subsp. yamanashiensis, NBRC 102159, NCIB 10560, NCIB:10560, NCIMB 10560, NRRL B-4563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.