Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN29096.1 | KRN30677.1 | IV36_GL000413 | IV36_GL002037 | Short chain dehydrogenase. | Macrolide-efflux protein. | 0.893 |
KRN29096.1 | KRN31081.1 | IV36_GL000413 | IV36_GL001884 | Short chain dehydrogenase. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.883 |
KRN29096.1 | KRN31151.1 | IV36_GL000413 | IV36_GL001961 | Short chain dehydrogenase. | Phosphoglucomutase. | 0.876 |
KRN29096.1 | KRN31575.1 | IV36_GL000413 | IV36_GL001697 | Short chain dehydrogenase. | malonyl-CoA-[acyl-carrier-protein] transacylase. | 0.949 |
KRN29096.1 | KRN31577.1 | IV36_GL000413 | IV36_GL001699 | Short chain dehydrogenase. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.948 |
KRN29096.1 | KRN31583.1 | IV36_GL000413 | IV36_GL001705 | Short chain dehydrogenase. | Enoyl-(acyl carrier protein) reductase. | 0.904 |
KRN29096.1 | KRN32067.1 | IV36_GL000413 | IV36_GL001318 | Short chain dehydrogenase. | Glutamate synthase large subunit. | 0.927 |
KRN29096.1 | fabZ | IV36_GL000413 | IV36_GL001693 | Short chain dehydrogenase. | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.945 |
KRN29096.1 | fabZ-2 | IV36_GL000413 | IV36_GL001701 | Short chain dehydrogenase. | (3R)-hydroxymyristoyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.925 |
KRN29096.1 | tpiA | IV36_GL000413 | IV36_GL001882 | Short chain dehydrogenase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.884 |
KRN30677.1 | KRN29096.1 | IV36_GL002037 | IV36_GL000413 | Macrolide-efflux protein. | Short chain dehydrogenase. | 0.893 |
KRN30677.1 | KRN31081.1 | IV36_GL002037 | IV36_GL001884 | Macrolide-efflux protein. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.485 |
KRN30677.1 | KRN31575.1 | IV36_GL002037 | IV36_GL001697 | Macrolide-efflux protein. | malonyl-CoA-[acyl-carrier-protein] transacylase. | 0.966 |
KRN30677.1 | KRN31577.1 | IV36_GL002037 | IV36_GL001699 | Macrolide-efflux protein. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.926 |
KRN30677.1 | KRN31583.1 | IV36_GL002037 | IV36_GL001705 | Macrolide-efflux protein. | Enoyl-(acyl carrier protein) reductase. | 0.854 |
KRN30677.1 | KRN32067.1 | IV36_GL002037 | IV36_GL001318 | Macrolide-efflux protein. | Glutamate synthase large subunit. | 0.454 |
KRN30677.1 | fabZ | IV36_GL002037 | IV36_GL001693 | Macrolide-efflux protein. | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.528 |
KRN30677.1 | fabZ-2 | IV36_GL002037 | IV36_GL001701 | Macrolide-efflux protein. | (3R)-hydroxymyristoyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.528 |
KRN31081.1 | KRN29096.1 | IV36_GL001884 | IV36_GL000413 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Short chain dehydrogenase. | 0.883 |
KRN31081.1 | KRN30677.1 | IV36_GL001884 | IV36_GL002037 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Macrolide-efflux protein. | 0.485 |
page 1 of 4