Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRN26561.1 | KRN27242.1 | IV36_GL001830 | IV36_GL001064 | Sugar-specific permease. | PTS family porter. | 0.998 |
| KRN26561.1 | KRN28296.1 | IV36_GL001830 | IV36_GL000548 | Sugar-specific permease. | N-acetylglucosamine-6-phosphate deacetylase. | 0.969 |
| KRN26561.1 | KRN29922.1 | IV36_GL001830 | IV36_GL000337 | Sugar-specific permease. | Beta-glucosides PTS, EIIBCA. | 0.998 |
| KRN26561.1 | KRN32052.1 | IV36_GL001830 | IV36_GL001303 | Sugar-specific permease. | PTS system, trehalose-specific IIBC component. | 0.998 |
| KRN26561.1 | KRN32053.1 | IV36_GL001830 | IV36_GL001304 | Sugar-specific permease. | Trehalose PTS II ABC. | 0.998 |
| KRN26561.1 | glmM | IV36_GL001830 | IV36_GL000453 | Sugar-specific permease. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.918 |
| KRN26561.1 | glmS | IV36_GL001830 | IV36_GL001298 | Sugar-specific permease. | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.946 |
| KRN26561.1 | glmU | IV36_GL001830 | IV36_GL001134 | Sugar-specific permease. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.476 |
| KRN26561.1 | nagB | IV36_GL001830 | IV36_GL001129 | Sugar-specific permease. | Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.965 |
| KRN27242.1 | KRN26561.1 | IV36_GL001064 | IV36_GL001830 | PTS family porter. | Sugar-specific permease. | 0.998 |
| KRN27242.1 | KRN28296.1 | IV36_GL001064 | IV36_GL000548 | PTS family porter. | N-acetylglucosamine-6-phosphate deacetylase. | 0.969 |
| KRN27242.1 | KRN29922.1 | IV36_GL001064 | IV36_GL000337 | PTS family porter. | Beta-glucosides PTS, EIIBCA. | 0.998 |
| KRN27242.1 | KRN32052.1 | IV36_GL001064 | IV36_GL001303 | PTS family porter. | PTS system, trehalose-specific IIBC component. | 0.998 |
| KRN27242.1 | KRN32053.1 | IV36_GL001064 | IV36_GL001304 | PTS family porter. | Trehalose PTS II ABC. | 0.998 |
| KRN27242.1 | glmM | IV36_GL001064 | IV36_GL000453 | PTS family porter. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.918 |
| KRN27242.1 | glmS | IV36_GL001064 | IV36_GL001298 | PTS family porter. | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.946 |
| KRN27242.1 | glmU | IV36_GL001064 | IV36_GL001134 | PTS family porter. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.476 |
| KRN27242.1 | nagB | IV36_GL001064 | IV36_GL001129 | PTS family porter. | Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.965 |
| KRN28296.1 | KRN26561.1 | IV36_GL000548 | IV36_GL001830 | N-acetylglucosamine-6-phosphate deacetylase. | Sugar-specific permease. | 0.969 |
| KRN28296.1 | KRN27242.1 | IV36_GL000548 | IV36_GL001064 | N-acetylglucosamine-6-phosphate deacetylase. | PTS family porter. | 0.969 |
page 1 of 5