Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN26584.1 | KRN29089.1 | IV36_GL001824 | IV36_GL000406 | Integral membrane protein. | ABC transporter ATP-binding protein. | 0.681 |
KRN26584.1 | ecfA | IV36_GL001824 | IV36_GL000645 | Integral membrane protein. | Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.956 |
KRN26584.1 | ecfA-2 | IV36_GL001824 | IV36_GL000646 | Integral membrane protein. | Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.957 |
KRN26584.1 | ecfT | IV36_GL001824 | IV36_GL000647 | Integral membrane protein. | Cobalt transport permease; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.960 |
KRN26722.1 | KRN29089.1 | IV36_GL001541 | IV36_GL000406 | Hypothetical protein. | ABC transporter ATP-binding protein. | 0.681 |
KRN26722.1 | KRN31181.1 | IV36_GL001541 | IV36_GL001992 | Hypothetical protein. | Hypothetical protein. | 0.464 |
KRN26722.1 | ecfA | IV36_GL001541 | IV36_GL000645 | Hypothetical protein. | Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.956 |
KRN26722.1 | ecfA-2 | IV36_GL001541 | IV36_GL000646 | Hypothetical protein. | Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.956 |
KRN26722.1 | ecfT | IV36_GL001541 | IV36_GL000647 | Hypothetical protein. | Cobalt transport permease; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.960 |
KRN27375.1 | KRN29089.1 | IV36_GL000984 | IV36_GL000406 | BioY protein. | ABC transporter ATP-binding protein. | 0.748 |
KRN27375.1 | KRN33095.1 | IV36_GL000984 | IV36_GL000828 | BioY protein. | BioY protein. | 0.727 |
KRN27375.1 | ecfA | IV36_GL000984 | IV36_GL000645 | BioY protein. | Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.952 |
KRN27375.1 | ecfA-2 | IV36_GL000984 | IV36_GL000646 | BioY protein. | Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.952 |
KRN27375.1 | ecfT | IV36_GL000984 | IV36_GL000647 | BioY protein. | Cobalt transport permease; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.966 |
KRN29089.1 | KRN26584.1 | IV36_GL000406 | IV36_GL001824 | ABC transporter ATP-binding protein. | Integral membrane protein. | 0.681 |
KRN29089.1 | KRN26722.1 | IV36_GL000406 | IV36_GL001541 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.681 |
KRN29089.1 | KRN27375.1 | IV36_GL000406 | IV36_GL000984 | ABC transporter ATP-binding protein. | BioY protein. | 0.748 |
KRN29089.1 | KRN31181.1 | IV36_GL000406 | IV36_GL001992 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.737 |
KRN29089.1 | KRN33095.1 | IV36_GL000406 | IV36_GL000828 | ABC transporter ATP-binding protein. | BioY protein. | 0.748 |
KRN29089.1 | KRN33133.1 | IV36_GL000406 | IV36_GL000866 | ABC transporter ATP-binding protein. | ABC transporter ATP-binding protein. | 0.645 |
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