STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN27786.1GtcA family membrane protein. (138 aa)    
Predicted Functional Partners:
KRN27003.1
Teichoic acid polysaccharide glycosyl transferase.
 
 
 0.660
KRN32067.1
Glutamate synthase large subunit.
      
 0.577
KRN33118.1
Glycosyltransferase.
  
 
 0.567
KRN27788.1
Oxidoreductase.
 
     0.552
KRN27787.1
Hypothetical protein.
       0.551
KRN30708.1
Glycosyl transferase family 2.
  
 
 0.529
KRN33088.1
Glycosyltransferase.
 
 
 0.512
KRN26889.1
Glycosyltransferase.
 
 
 0.510
KRN34267.1
Hypothetical protein.
 
  
 0.445
KRN27104.1
Hypothetical protein.
 
  
 0.437
Your Current Organism:
Lactobacillus mali
NCBI taxonomy Id: 1618
Other names: ATCC 27053, ATCC 27304 [[Lactobacillus yamanashiensis subsp. yamanashiensis]], CCUG 30141, CCUG 32228, CIP 103142, DSM 20444, KCTC 3596, L. mali, LMG 6899, LMG:6899, Lactobacillus yamanashiensis, Lactobacillus yamanashiensis subsp. mali, Lactobacillus yamanashiensis subsp. yamanashiensis, NBRC 102159, NCIB 10560, NCIB:10560, NCIMB 10560, NRRL B-4563
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