Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN28031.1 | KRN33082.1 | IV36_GL000566 | IV36_GL000815 | Glycopeptide antibiotics resistance protein. | Ferric reductase. | 0.716 |
KRN28031.1 | KRN33083.1 | IV36_GL000566 | IV36_GL000816 | Glycopeptide antibiotics resistance protein. | Thiamine biosynthesis membrane-associated lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.627 |
KRN28031.1 | KRN33084.1 | IV36_GL000566 | IV36_GL000817 | Glycopeptide antibiotics resistance protein. | Hypothetical protein. | 0.546 |
KRN28031.1 | KRN33086.1 | IV36_GL000566 | IV36_GL000819 | Glycopeptide antibiotics resistance protein. | Signal transduction histidine kinase. | 0.633 |
KRN28031.1 | KRN33087.1 | IV36_GL000566 | IV36_GL000820 | Glycopeptide antibiotics resistance protein. | Hypothetical protein. | 0.734 |
KRN28031.1 | KRN33091.1 | IV36_GL000566 | IV36_GL000824 | Glycopeptide antibiotics resistance protein. | Phosphatidylglycerophosphatase B. | 0.577 |
KRN28031.1 | KRN33092.1 | IV36_GL000566 | IV36_GL000825 | Glycopeptide antibiotics resistance protein. | Hypothetical protein. | 0.689 |
KRN28032.1 | KRN28033.1 | IV36_GL000567 | IV36_GL000568 | Transcriptional regulator. | Multidrug ABC transporter permease. | 0.889 |
KRN28032.1 | KRN33082.1 | IV36_GL000567 | IV36_GL000815 | Transcriptional regulator. | Ferric reductase. | 0.568 |
KRN28032.1 | KRN33083.1 | IV36_GL000567 | IV36_GL000816 | Transcriptional regulator. | Thiamine biosynthesis membrane-associated lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.587 |
KRN28032.1 | KRN33084.1 | IV36_GL000567 | IV36_GL000817 | Transcriptional regulator. | Hypothetical protein. | 0.616 |
KRN28033.1 | KRN28032.1 | IV36_GL000568 | IV36_GL000567 | Multidrug ABC transporter permease. | Transcriptional regulator. | 0.889 |
KRN28033.1 | KRN33082.1 | IV36_GL000568 | IV36_GL000815 | Multidrug ABC transporter permease. | Ferric reductase. | 0.556 |
KRN28033.1 | KRN33083.1 | IV36_GL000568 | IV36_GL000816 | Multidrug ABC transporter permease. | Thiamine biosynthesis membrane-associated lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.537 |
KRN28033.1 | KRN33084.1 | IV36_GL000568 | IV36_GL000817 | Multidrug ABC transporter permease. | Hypothetical protein. | 0.582 |
KRN33082.1 | KRN28031.1 | IV36_GL000815 | IV36_GL000566 | Ferric reductase. | Glycopeptide antibiotics resistance protein. | 0.716 |
KRN33082.1 | KRN28032.1 | IV36_GL000815 | IV36_GL000567 | Ferric reductase. | Transcriptional regulator. | 0.568 |
KRN33082.1 | KRN28033.1 | IV36_GL000815 | IV36_GL000568 | Ferric reductase. | Multidrug ABC transporter permease. | 0.556 |
KRN33082.1 | KRN33083.1 | IV36_GL000815 | IV36_GL000816 | Ferric reductase. | Thiamine biosynthesis membrane-associated lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.956 |
KRN33082.1 | KRN33084.1 | IV36_GL000815 | IV36_GL000817 | Ferric reductase. | Hypothetical protein. | 0.918 |
page 1 of 4