STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN33084.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
KRN33083.1
Thiamine biosynthesis membrane-associated lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
  
 0.924
KRN33082.1
Ferric reductase.
 
     0.918
KRN33087.1
Hypothetical protein.
 
     0.797
KRN33086.1
Signal transduction histidine kinase.
 
     0.779
KRN33092.1
Hypothetical protein.
  
     0.712
KRN33091.1
Phosphatidylglycerophosphatase B.
  
     0.676
KRN28032.1
Transcriptional regulator.
  
     0.616
KRN28033.1
Multidrug ABC transporter permease.
  
     0.582
KRN28031.1
Glycopeptide antibiotics resistance protein.
  
     0.546
KRN33085.1
Winged helix family two component transcriptional regulator.
       0.509
Your Current Organism:
Lactobacillus mali
NCBI taxonomy Id: 1618
Other names: ATCC 27053, ATCC 27304 [[Lactobacillus yamanashiensis subsp. yamanashiensis]], CCUG 30141, CCUG 32228, CIP 103142, DSM 20444, KCTC 3596, L. mali, LMG 6899, LMG:6899, Lactobacillus yamanashiensis, Lactobacillus yamanashiensis subsp. mali, Lactobacillus yamanashiensis subsp. yamanashiensis, NBRC 102159, NCIB 10560, NCIB:10560, NCIMB 10560, NRRL B-4563
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