Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN26664.1 | KRN33121.1 | IV36_GL001614 | IV36_GL000854 | Transcription regulator. | Signal transduction diguanylate cyclase. | 0.551 |
KRN26664.1 | guaB | IV36_GL001614 | IV36_GL001849 | Transcription regulator. | Inosine 5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.442 |
KRN29873.1 | KRN33121.1 | IV36_GL000288 | IV36_GL000854 | Methyl-accepting chemotaxis sensory transducer. | Signal transduction diguanylate cyclase. | 0.573 |
KRN29873.1 | KRN33137.1 | IV36_GL000288 | IV36_GL000871 | Methyl-accepting chemotaxis sensory transducer. | C-di-GMP-specific phosphodiesterase. | 0.431 |
KRN29874.1 | KRN33121.1 | IV36_GL000289 | IV36_GL000854 | Methyl-accepting chemotaxis sensory transducer. | Signal transduction diguanylate cyclase. | 0.559 |
KRN29874.1 | KRN33137.1 | IV36_GL000289 | IV36_GL000871 | Methyl-accepting chemotaxis sensory transducer. | C-di-GMP-specific phosphodiesterase. | 0.430 |
KRN29891.1 | KRN32083.1 | IV36_GL000306 | IV36_GL001334 | C-di-GMP-specific phosphodiesterase. | Diguanylate cyclase phosphodiesterase domain-containing protein. | 0.657 |
KRN29891.1 | KRN33118.1 | IV36_GL000306 | IV36_GL000851 | C-di-GMP-specific phosphodiesterase. | Glycosyltransferase. | 0.792 |
KRN29891.1 | KRN33120.1 | IV36_GL000306 | IV36_GL000853 | C-di-GMP-specific phosphodiesterase. | Hypothetical protein. | 0.567 |
KRN29891.1 | KRN33121.1 | IV36_GL000306 | IV36_GL000854 | C-di-GMP-specific phosphodiesterase. | Signal transduction diguanylate cyclase. | 0.880 |
KRN32083.1 | KRN29891.1 | IV36_GL001334 | IV36_GL000306 | Diguanylate cyclase phosphodiesterase domain-containing protein. | C-di-GMP-specific phosphodiesterase. | 0.657 |
KRN32083.1 | KRN33118.1 | IV36_GL001334 | IV36_GL000851 | Diguanylate cyclase phosphodiesterase domain-containing protein. | Glycosyltransferase. | 0.648 |
KRN32083.1 | KRN33121.1 | IV36_GL001334 | IV36_GL000854 | Diguanylate cyclase phosphodiesterase domain-containing protein. | Signal transduction diguanylate cyclase. | 0.824 |
KRN32083.1 | KRN33137.1 | IV36_GL001334 | IV36_GL000871 | Diguanylate cyclase phosphodiesterase domain-containing protein. | C-di-GMP-specific phosphodiesterase. | 0.711 |
KRN33118.1 | KRN29891.1 | IV36_GL000851 | IV36_GL000306 | Glycosyltransferase. | C-di-GMP-specific phosphodiesterase. | 0.792 |
KRN33118.1 | KRN32083.1 | IV36_GL000851 | IV36_GL001334 | Glycosyltransferase. | Diguanylate cyclase phosphodiesterase domain-containing protein. | 0.648 |
KRN33118.1 | KRN33120.1 | IV36_GL000851 | IV36_GL000853 | Glycosyltransferase. | Hypothetical protein. | 0.833 |
KRN33118.1 | KRN33121.1 | IV36_GL000851 | IV36_GL000854 | Glycosyltransferase. | Signal transduction diguanylate cyclase. | 0.674 |
KRN33118.1 | KRN33137.1 | IV36_GL000851 | IV36_GL000871 | Glycosyltransferase. | C-di-GMP-specific phosphodiesterase. | 0.722 |
KRN33120.1 | KRN29891.1 | IV36_GL000853 | IV36_GL000306 | Hypothetical protein. | C-di-GMP-specific phosphodiesterase. | 0.567 |
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