Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN27152.1 | KRN33125.1 | IV36_GL001147 | IV36_GL000858 | IpaB EvcA family protein. | Hypothetical protein. | 0.460 |
KRN27158.1 | KRN33099.1 | IV36_GL001153 | IV36_GL000832 | ComX; Belongs to the sigma-70 factor family. | Hypothetical protein; Belongs to the sigma-70 factor family. | 0.746 |
KRN27158.1 | KRN33125.1 | IV36_GL001153 | IV36_GL000858 | ComX; Belongs to the sigma-70 factor family. | Hypothetical protein. | 0.465 |
KRN30259.1 | KRN33125.1 | IV36_GL002298 | IV36_GL000858 | Peptidoglycan binding protein. | Hypothetical protein. | 0.422 |
KRN33099.1 | KRN27158.1 | IV36_GL000832 | IV36_GL001153 | Hypothetical protein; Belongs to the sigma-70 factor family. | ComX; Belongs to the sigma-70 factor family. | 0.746 |
KRN33099.1 | KRN33125.1 | IV36_GL000832 | IV36_GL000858 | Hypothetical protein; Belongs to the sigma-70 factor family. | Hypothetical protein. | 0.716 |
KRN33125.1 | KRN27152.1 | IV36_GL000858 | IV36_GL001147 | Hypothetical protein. | IpaB EvcA family protein. | 0.460 |
KRN33125.1 | KRN27158.1 | IV36_GL000858 | IV36_GL001153 | Hypothetical protein. | ComX; Belongs to the sigma-70 factor family. | 0.465 |
KRN33125.1 | KRN30259.1 | IV36_GL000858 | IV36_GL002298 | Hypothetical protein. | Peptidoglycan binding protein. | 0.422 |
KRN33125.1 | KRN33099.1 | IV36_GL000858 | IV36_GL000832 | Hypothetical protein. | Hypothetical protein; Belongs to the sigma-70 factor family. | 0.716 |
KRN33125.1 | KRN33126.1 | IV36_GL000858 | IV36_GL000859 | Hypothetical protein. | Hypothetical protein. | 0.655 |
KRN33126.1 | KRN33125.1 | IV36_GL000859 | IV36_GL000858 | Hypothetical protein. | Hypothetical protein. | 0.655 |