Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN33170.1 | KRN33171.1 | IV36_GL000905 | IV36_GL000906 | Dipeptidase. | Hypothetical protein. | 0.520 |
KRN33170.1 | KRN33172.1 | IV36_GL000905 | IV36_GL000907 | Dipeptidase. | Hypothetical protein; Belongs to the 4-oxalocrotonate tautomerase family. | 0.401 |
KRN33170.1 | ftsH | IV36_GL000905 | IV36_GL001052 | Dipeptidase. | Cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.418 |
KRN33170.1 | pepX | IV36_GL000905 | IV36_GL001184 | Dipeptidase. | X-prolyl-dipeptidyl aminopeptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family. | 0.487 |
KRN33171.1 | KRN33170.1 | IV36_GL000906 | IV36_GL000905 | Hypothetical protein. | Dipeptidase. | 0.520 |
KRN33171.1 | KRN33172.1 | IV36_GL000906 | IV36_GL000907 | Hypothetical protein. | Hypothetical protein; Belongs to the 4-oxalocrotonate tautomerase family. | 0.596 |
KRN33172.1 | KRN33170.1 | IV36_GL000907 | IV36_GL000905 | Hypothetical protein; Belongs to the 4-oxalocrotonate tautomerase family. | Dipeptidase. | 0.401 |
KRN33172.1 | KRN33171.1 | IV36_GL000907 | IV36_GL000906 | Hypothetical protein; Belongs to the 4-oxalocrotonate tautomerase family. | Hypothetical protein. | 0.596 |
ftsH | KRN33170.1 | IV36_GL001052 | IV36_GL000905 | Cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Dipeptidase. | 0.418 |
pepX | KRN33170.1 | IV36_GL001184 | IV36_GL000905 | X-prolyl-dipeptidyl aminopeptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family. | Dipeptidase. | 0.487 |