Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRN26560.1 | guaA | IV36_GL001829 | IV36_GL001204 | LacI family transcription regulator. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.556 |
| KRN26560.1 | pdxS | IV36_GL001829 | IV36_GL001073 | LacI family transcription regulator. | Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.592 |
| KRN26560.1 | pdxT | IV36_GL001829 | IV36_GL001074 | LacI family transcription regulator. | Glutamine amidotransferase subunit PdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.595 |
| KRN26560.1 | rbsK | IV36_GL001829 | IV36_GL001494 | LacI family transcription regulator. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.830 |
| KRN26865.1 | guaA | IV36_GL001497 | IV36_GL001204 | Catabolite control protein A. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.556 |
| KRN26865.1 | pdxS | IV36_GL001497 | IV36_GL001073 | Catabolite control protein A. | Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.623 |
| KRN26865.1 | pdxT | IV36_GL001497 | IV36_GL001074 | Catabolite control protein A. | Glutamine amidotransferase subunit PdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.626 |
| KRN26865.1 | rbsK | IV36_GL001497 | IV36_GL001494 | Catabolite control protein A. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.830 |
| KRN26991.1 | KRN32144.1 | IV36_GL001245 | IV36_GL001398 | Hydroxymethylpyrimidine phosphomethylpyrimidine kinase. | Pyridoxal kinase. | 0.810 |
| KRN26991.1 | guaA | IV36_GL001245 | IV36_GL001204 | Hydroxymethylpyrimidine phosphomethylpyrimidine kinase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.561 |
| KRN26991.1 | pdxS | IV36_GL001245 | IV36_GL001073 | Hydroxymethylpyrimidine phosphomethylpyrimidine kinase. | Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.618 |
| KRN26991.1 | pdxT | IV36_GL001245 | IV36_GL001074 | Hydroxymethylpyrimidine phosphomethylpyrimidine kinase. | Glutamine amidotransferase subunit PdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.605 |
| KRN27250.1 | pdxS | IV36_GL001072 | IV36_GL001073 | GntR family transcriptional regulator. | Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.659 |
| KRN27250.1 | pdxT | IV36_GL001072 | IV36_GL001074 | GntR family transcriptional regulator. | Glutamine amidotransferase subunit PdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.629 |
| KRN30009.1 | guaA | IV36_GL000278 | IV36_GL001204 | PurR family transcriptional regulator. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.556 |
| KRN30009.1 | pdxS | IV36_GL000278 | IV36_GL001073 | PurR family transcriptional regulator. | Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.592 |
| KRN30009.1 | pdxT | IV36_GL000278 | IV36_GL001074 | PurR family transcriptional regulator. | Glutamine amidotransferase subunit PdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.595 |
| KRN30009.1 | rbsK | IV36_GL000278 | IV36_GL001494 | PurR family transcriptional regulator. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.812 |
| KRN31657.1 | guaA | IV36_GL001781 | IV36_GL001204 | Ribose operon repressor. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.556 |
| KRN31657.1 | pdxS | IV36_GL001781 | IV36_GL001073 | Ribose operon repressor. | Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.585 |
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