STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN27083.1Glutamine transport ATP-binding protein. (244 aa)    
Predicted Functional Partners:
KRN27085.1
Glutamine transport system permease.
 0.999
KRN27086.1
Glutamine transport system permease.
 0.999
KRN30210.1
Polar amino acid ABC transporter permease.
 0.993
KRN27782.1
Amino acid ABC transporter permease.
 0.990
KRN29842.1
Glutamine-binding protein glutamine transport system permease.
 0.984
KRN27084.1
Glutamine ABC transporter, substrate binding protein.
 0.984
KRN34255.1
Amino acid ABC transporter.
 0.971
KRN30246.1
Polar amino acid ABC transporter inner membrane subunit.
 0.965
KRN32043.1
Transport ATP-binding protein CydC.
 
     
0.888
KRN27090.1
Peptide nickel transport system permease protein.
 
    
 0.886
Your Current Organism:
Lactobacillus mali
NCBI taxonomy Id: 1618
Other names: ATCC 27053, ATCC 27304 [[Lactobacillus yamanashiensis subsp. yamanashiensis]], CCUG 30141, CCUG 32228, CIP 103142, DSM 20444, KCTC 3596, L. mali, LMG 6899, LMG:6899, Lactobacillus yamanashiensis, Lactobacillus yamanashiensis subsp. mali, Lactobacillus yamanashiensis subsp. yamanashiensis, NBRC 102159, NCIB 10560, NCIB:10560, NCIMB 10560, NRRL B-4563
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