STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN32040.11,4-dihydroxy-2-naphthoate octaprenyltransferase. (303 aa)    
Predicted Functional Partners:
KRN32039.1
Pyridine nucleotide-disulfide family oxidoreductase.
 
 
 0.971
KRN32041.1
Polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
  
 0.959
KRN32094.1
ComA operon protein 2.
    
 0.915
KRN27153.1
3-hydroxy-3-methylglutaryl-coenzyme A reductase 3-hydroxy-3-methylglutaryl-coenzyme Auctase; Belongs to the HMG-CoA reductase family.
    
 
 0.864
menG
Menaquinone biosynthesis methyltransferase MenH; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
    
 0.829
KRN32042.1
Transport ATP-binding protein CydD.
 
   
 0.813
KRN32043.1
Transport ATP-binding protein CydC.
 
     0.789
KRN32044.1
Cytochrome d ubiquinol oxidase, subunit II.
 
     0.700
KRN32045.1
Cytochrome bd-type oxidase subunit I.
 
   
 0.624
KRN26636.1
Iron-sulfur cluster assembly repair protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
   
 0.525
Your Current Organism:
Lactobacillus mali
NCBI taxonomy Id: 1618
Other names: ATCC 27053, ATCC 27304 [[Lactobacillus yamanashiensis subsp. yamanashiensis]], CCUG 30141, CCUG 32228, CIP 103142, DSM 20444, KCTC 3596, L. mali, LMG 6899, LMG:6899, Lactobacillus yamanashiensis, Lactobacillus yamanashiensis subsp. mali, Lactobacillus yamanashiensis subsp. yamanashiensis, NBRC 102159, NCIB 10560, NCIB:10560, NCIMB 10560, NRRL B-4563
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