Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN26637.1 | KRN32141.1 | IV36_GL001794 | IV36_GL001395 | Hypothetical protein. | Polysaccharide biosynthesis protein. | 0.522 |
KRN32140.1 | KRN32141.1 | IV36_GL001394 | IV36_GL001395 | L-alanine-dl-glutamate epimerase related enzyme of enolase superfamily protein. | Polysaccharide biosynthesis protein. | 0.404 |
KRN32141.1 | KRN26637.1 | IV36_GL001395 | IV36_GL001794 | Polysaccharide biosynthesis protein. | Hypothetical protein. | 0.522 |
KRN32141.1 | KRN32140.1 | IV36_GL001395 | IV36_GL001394 | Polysaccharide biosynthesis protein. | L-alanine-dl-glutamate epimerase related enzyme of enolase superfamily protein. | 0.404 |
KRN32141.1 | KRN32142.1 | IV36_GL001395 | IV36_GL001396 | Polysaccharide biosynthesis protein. | Hypothetical protein. | 0.479 |
KRN32141.1 | KRN34210.1 | IV36_GL001395 | IV36_GL000004 | Polysaccharide biosynthesis protein. | Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | 0.589 |
KRN32141.1 | mrnC | IV36_GL001395 | IV36_GL000527 | Polysaccharide biosynthesis protein. | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.417 |
KRN32141.1 | whiA | IV36_GL001395 | IV36_GL001953 | Polysaccharide biosynthesis protein. | Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation. | 0.419 |
KRN32142.1 | KRN32141.1 | IV36_GL001396 | IV36_GL001395 | Hypothetical protein. | Polysaccharide biosynthesis protein. | 0.479 |
KRN34210.1 | KRN32141.1 | IV36_GL000004 | IV36_GL001395 | Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | Polysaccharide biosynthesis protein. | 0.589 |
mrnC | KRN32141.1 | IV36_GL000527 | IV36_GL001395 | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | Polysaccharide biosynthesis protein. | 0.417 |
mrnC | whiA | IV36_GL000527 | IV36_GL001953 | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation. | 0.477 |
whiA | KRN32141.1 | IV36_GL001953 | IV36_GL001395 | Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation. | Polysaccharide biosynthesis protein. | 0.419 |
whiA | mrnC | IV36_GL001953 | IV36_GL000527 | Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation. | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.477 |