Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN26785.1 | KRN26786.1 | IV36_GL001501 | IV36_GL001502 | Oligoendopeptidase F. | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-serine, forming acetyl-L-serine; Belongs to the MetA family. | 0.517 |
KRN26785.1 | KRN27312.1 | IV36_GL001501 | IV36_GL001039 | Oligoendopeptidase F. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.451 |
KRN26785.1 | KRN27372.1 | IV36_GL001501 | IV36_GL000981 | Oligoendopeptidase F. | Hypothetical protein. | 0.500 |
KRN26785.1 | KRN30418.1 | IV36_GL001501 | IV36_GL002176 | Oligoendopeptidase F. | Hypothetical protein. | 0.535 |
KRN26785.1 | KRN30720.1 | IV36_GL001501 | IV36_GL002081 | Oligoendopeptidase F. | Flagellar motor switch protein FliM. | 0.469 |
KRN26785.1 | KRN31547.1 | IV36_GL001501 | IV36_GL001669 | Oligoendopeptidase F. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.417 |
KRN26785.1 | KRN34309.1 | IV36_GL001501 | IV36_GL000108 | Oligoendopeptidase F. | Aspartate kinase I; Belongs to the aspartokinase family. | 0.433 |
KRN26785.1 | dapA | IV36_GL001501 | IV36_GL000160 | Oligoendopeptidase F. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.534 |
KRN26785.1 | dapB | IV36_GL001501 | IV36_GL002339 | Oligoendopeptidase F. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.454 |
KRN26785.1 | dapF | IV36_GL001501 | IV36_GL000126 | Oligoendopeptidase F. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.453 |
KRN26786.1 | KRN26785.1 | IV36_GL001502 | IV36_GL001501 | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-serine, forming acetyl-L-serine; Belongs to the MetA family. | Oligoendopeptidase F. | 0.517 |
KRN26786.1 | KRN34309.1 | IV36_GL001502 | IV36_GL000108 | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-serine, forming acetyl-L-serine; Belongs to the MetA family. | Aspartate kinase I; Belongs to the aspartokinase family. | 0.609 |
KRN27312.1 | KRN26785.1 | IV36_GL001039 | IV36_GL001501 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Oligoendopeptidase F. | 0.451 |
KRN27312.1 | KRN27372.1 | IV36_GL001039 | IV36_GL000981 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Hypothetical protein. | 0.462 |
KRN27312.1 | KRN34309.1 | IV36_GL001039 | IV36_GL000108 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Aspartate kinase I; Belongs to the aspartokinase family. | 0.519 |
KRN27312.1 | dapA | IV36_GL001039 | IV36_GL000160 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.597 |
KRN27312.1 | dapB | IV36_GL001039 | IV36_GL002339 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.650 |
KRN27312.1 | dapF | IV36_GL001039 | IV36_GL000126 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.484 |
KRN27372.1 | KRN26785.1 | IV36_GL000981 | IV36_GL001501 | Hypothetical protein. | Oligoendopeptidase F. | 0.500 |
KRN27372.1 | KRN27312.1 | IV36_GL000981 | IV36_GL001039 | Hypothetical protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.462 |
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