STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN26769.1Hypothetical protein. (328 aa)    
Predicted Functional Partners:
KRN26770.1
Taurine ABC transporter permease.
 
 
 0.969
KRN26771.1
Taurine import ATP-binding protein TauB.
 
 
 0.967
KRN30111.1
ABC transporter permease.
 
 
 0.924
KRN29077.1
Binding-protein-dependent transport system inner membrane protein.
 
 
 0.920
KRN29078.1
ABC transporter ATP-binding protein.
 
 
 0.902
KRN30112.1
ABC transporter ATP-binding protein.
 
 
 0.817
KRN33080.1
FAD FMN-containing dehydrogenase.
  
 
 0.611
KRN27501.1
Oxidoreductase.
  
 
 0.576
KRN30110.1
ABC transporter substrate-binding protein.
  
  
 
0.563
KRN29828.1
Fumarate reductase, flavoprotein subunit precursor.
  
 
  0.558
Your Current Organism:
Lactobacillus mali
NCBI taxonomy Id: 1618
Other names: ATCC 27053, ATCC 27304 [[Lactobacillus yamanashiensis subsp. yamanashiensis]], CCUG 30141, CCUG 32228, CIP 103142, DSM 20444, KCTC 3596, L. mali, LMG 6899, LMG:6899, Lactobacillus yamanashiensis, Lactobacillus yamanashiensis subsp. mali, Lactobacillus yamanashiensis subsp. yamanashiensis, NBRC 102159, NCIB 10560, NCIB:10560, NCIMB 10560, NRRL B-4563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.