STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN26704.1Proline glycine betaine ABC transporter ATPase. (319 aa)    
Predicted Functional Partners:
KRN26703.1
Glycine betaine carnitine choline ABC transporter substrate-binding and permease.
 0.999
KRN29993.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
    
0.907
KRN26869.1
ABC-type dipeptide oligopeptide nickel transport system, ATPase component.
 
    
0.904
KRN27795.1
ABC transporter.
 
     
0.890
KRN26705.1
Glutathione reductase.
 
   
 0.890
KRN26689.1
Multidrug ABC transporter ATPase permease.
 
     
0.874
KRN27796.1
Multidrug ABC transporter ATPase permease.
 
     
0.873
KRN26690.1
Multidrug ABC transporter ATPase permease.
 
     
0.852
KRN34221.1
ABC transporter, ATP-binding protein.
 
    
0.849
KRN29899.1
Multidrug ABC transporter permease ATP-binding protein.
 
     
0.819
Your Current Organism:
Lactobacillus mali
NCBI taxonomy Id: 1618
Other names: ATCC 27053, ATCC 27304 [[Lactobacillus yamanashiensis subsp. yamanashiensis]], CCUG 30141, CCUG 32228, CIP 103142, DSM 20444, KCTC 3596, L. mali, LMG 6899, LMG:6899, Lactobacillus yamanashiensis, Lactobacillus yamanashiensis subsp. mali, Lactobacillus yamanashiensis subsp. yamanashiensis, NBRC 102159, NCIB 10560, NCIB:10560, NCIMB 10560, NRRL B-4563
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