STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN31542.1Hypothetical protein. (185 aa)    
Predicted Functional Partners:
KRN27129.1
Hypothetical protein.
  
     0.697
KRN27130.1
Lipoprotein.
  
     0.671
KRN28570.1
Hypothetical protein.
  
     0.642
KRN29959.1
Hypothetical protein.
  
     0.519
ackA-3
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.511
KRN34378.1
Hypothetical protein.
  
     0.503
KRN33178.1
Hypothetical protein.
  
     0.491
KRN27115.1
Teichoic acid translocation ATP-binding protein.
  
     0.481
KRN26725.1
MarR family transcriptional regulator.
  
     0.465
KRN30464.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Lactobacillus mali
NCBI taxonomy Id: 1618
Other names: ATCC 27053, ATCC 27304 [[Lactobacillus yamanashiensis subsp. yamanashiensis]], CCUG 30141, CCUG 32228, CIP 103142, DSM 20444, KCTC 3596, L. mali, LMG 6899, LMG:6899, Lactobacillus yamanashiensis, Lactobacillus yamanashiensis subsp. mali, Lactobacillus yamanashiensis subsp. yamanashiensis, NBRC 102159, NCIB 10560, NCIB:10560, NCIMB 10560, NRRL B-4563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.