STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN31655.1Transketolase. (272 aa)    
Predicted Functional Partners:
KRN31654.1
Transketolase, beta subunit.
 0.999
KRN30082.1
Ribulose-5-phosphate 3-epimerase.
  
 0.993
KRN34289.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.992
KRN26559.1
Ribulose-phosphate 3-epimerase.
  
 0.970
KRN31656.1
L-fucose isomerase.
 
    0.921
KRN31151.1
Phosphoglucomutase.
 
   
 0.904
KRN29922.1
Beta-glucosides PTS, EIIBCA.
    
  0.900
KRN27242.1
PTS family porter.
    
  0.900
KRN32052.1
PTS system, trehalose-specific IIBC component.
    
  0.900
KRN32053.1
Trehalose PTS II ABC.
    
  0.900
Your Current Organism:
Lactobacillus mali
NCBI taxonomy Id: 1618
Other names: ATCC 27053, ATCC 27304 [[Lactobacillus yamanashiensis subsp. yamanashiensis]], CCUG 30141, CCUG 32228, CIP 103142, DSM 20444, KCTC 3596, L. mali, LMG 6899, LMG:6899, Lactobacillus yamanashiensis, Lactobacillus yamanashiensis subsp. mali, Lactobacillus yamanashiensis subsp. yamanashiensis, NBRC 102159, NCIB 10560, NCIB:10560, NCIMB 10560, NRRL B-4563
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