STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN31102.1Atp-dependent clp protease proteolytic subunit; Belongs to the peptidase S14 family. (243 aa)    
Predicted Functional Partners:
clpX
ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
 
 0.979
KRN31105.1
Terminase.
 
     0.931
KRN31104.1
Phage portal protein, hk97 family.
  
    0.831
KRN31628.1
Phage portal protein, HK97.
 
    0.816
KRN31094.1
TP901 family phage tail tape measure protein.
 
     0.777
KRN31627.1
Terminase.
 
     0.773
KRN31103.1
Hypothetical protein.
       0.773
KRN31101.1
Major head protein Cps.
     
 0.735
KRN27812.1
ATP-binding protein; Belongs to the ClpA/ClpB family.
   
 
 0.730
KRN27623.1
ATP-dependent Clp protease; Belongs to the ClpA/ClpB family.
   
 
 0.730
Your Current Organism:
Lactobacillus mali
NCBI taxonomy Id: 1618
Other names: ATCC 27053, ATCC 27304 [[Lactobacillus yamanashiensis subsp. yamanashiensis]], CCUG 30141, CCUG 32228, CIP 103142, DSM 20444, KCTC 3596, L. mali, LMG 6899, LMG:6899, Lactobacillus yamanashiensis, Lactobacillus yamanashiensis subsp. mali, Lactobacillus yamanashiensis subsp. yamanashiensis, NBRC 102159, NCIB 10560, NCIB:10560, NCIMB 10560, NRRL B-4563
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