Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN27623.1 | KRN31102.1 | IV36_GL000723 | IV36_GL001907 | ATP-dependent Clp protease; Belongs to the ClpA/ClpB family. | Atp-dependent clp protease proteolytic subunit; Belongs to the peptidase S14 family. | 0.730 |
KRN27623.1 | clpX | IV36_GL000723 | IV36_GL000166 | ATP-dependent Clp protease; Belongs to the ClpA/ClpB family. | ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.543 |
KRN27812.1 | KRN31102.1 | IV36_GL000609 | IV36_GL001907 | ATP-binding protein; Belongs to the ClpA/ClpB family. | Atp-dependent clp protease proteolytic subunit; Belongs to the peptidase S14 family. | 0.730 |
KRN27812.1 | clpX | IV36_GL000609 | IV36_GL000166 | ATP-binding protein; Belongs to the ClpA/ClpB family. | ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.658 |
KRN31094.1 | KRN31102.1 | IV36_GL001898 | IV36_GL001907 | TP901 family phage tail tape measure protein. | Atp-dependent clp protease proteolytic subunit; Belongs to the peptidase S14 family. | 0.777 |
KRN31094.1 | KRN31105.1 | IV36_GL001898 | IV36_GL001910 | TP901 family phage tail tape measure protein. | Terminase. | 0.825 |
KRN31094.1 | KRN31627.1 | IV36_GL001898 | IV36_GL001751 | TP901 family phage tail tape measure protein. | Terminase. | 0.646 |
KRN31094.1 | KRN31628.1 | IV36_GL001898 | IV36_GL001752 | TP901 family phage tail tape measure protein. | Phage portal protein, HK97. | 0.417 |
KRN31101.1 | KRN31102.1 | IV36_GL001906 | IV36_GL001907 | Major head protein Cps. | Atp-dependent clp protease proteolytic subunit; Belongs to the peptidase S14 family. | 0.735 |
KRN31101.1 | KRN31103.1 | IV36_GL001906 | IV36_GL001908 | Major head protein Cps. | Hypothetical protein. | 0.714 |
KRN31101.1 | KRN31104.1 | IV36_GL001906 | IV36_GL001909 | Major head protein Cps. | Phage portal protein, hk97 family. | 0.778 |
KRN31101.1 | KRN31105.1 | IV36_GL001906 | IV36_GL001910 | Major head protein Cps. | Terminase. | 0.718 |
KRN31102.1 | KRN27623.1 | IV36_GL001907 | IV36_GL000723 | Atp-dependent clp protease proteolytic subunit; Belongs to the peptidase S14 family. | ATP-dependent Clp protease; Belongs to the ClpA/ClpB family. | 0.730 |
KRN31102.1 | KRN27812.1 | IV36_GL001907 | IV36_GL000609 | Atp-dependent clp protease proteolytic subunit; Belongs to the peptidase S14 family. | ATP-binding protein; Belongs to the ClpA/ClpB family. | 0.730 |
KRN31102.1 | KRN31094.1 | IV36_GL001907 | IV36_GL001898 | Atp-dependent clp protease proteolytic subunit; Belongs to the peptidase S14 family. | TP901 family phage tail tape measure protein. | 0.777 |
KRN31102.1 | KRN31101.1 | IV36_GL001907 | IV36_GL001906 | Atp-dependent clp protease proteolytic subunit; Belongs to the peptidase S14 family. | Major head protein Cps. | 0.735 |
KRN31102.1 | KRN31103.1 | IV36_GL001907 | IV36_GL001908 | Atp-dependent clp protease proteolytic subunit; Belongs to the peptidase S14 family. | Hypothetical protein. | 0.773 |
KRN31102.1 | KRN31104.1 | IV36_GL001907 | IV36_GL001909 | Atp-dependent clp protease proteolytic subunit; Belongs to the peptidase S14 family. | Phage portal protein, hk97 family. | 0.831 |
KRN31102.1 | KRN31105.1 | IV36_GL001907 | IV36_GL001910 | Atp-dependent clp protease proteolytic subunit; Belongs to the peptidase S14 family. | Terminase. | 0.931 |
KRN31102.1 | KRN31627.1 | IV36_GL001907 | IV36_GL001751 | Atp-dependent clp protease proteolytic subunit; Belongs to the peptidase S14 family. | Terminase. | 0.773 |
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