Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN26459.1 | KRN26460.1 | IV36_GL002009 | IV36_GL002010 | Hypothetical protein. | Hypothetical protein. | 0.618 |
KRN26460.1 | KRN26459.1 | IV36_GL002010 | IV36_GL002009 | Hypothetical protein. | Hypothetical protein. | 0.618 |
KRN26460.1 | KRN29831.1 | IV36_GL002010 | IV36_GL000378 | Hypothetical protein. | AraC family transcriptional regulator. | 0.458 |
KRN26460.1 | KRN30004.1 | IV36_GL002010 | IV36_GL000273 | Hypothetical protein. | AraC family transcriptional regulator. | 0.677 |
KRN26460.1 | KRN32067.1 | IV36_GL002010 | IV36_GL001318 | Hypothetical protein. | Glutamate synthase large subunit. | 0.859 |
KRN26460.1 | KRN32098.1 | IV36_GL002010 | IV36_GL001349 | Hypothetical protein. | Membrane signal transduction histidine kinase. | 0.556 |
KRN26460.1 | KRN33066.1 | IV36_GL002010 | IV36_GL000799 | Hypothetical protein. | Transcription regulator. | 0.851 |
KRN26460.1 | KRN33067.1 | IV36_GL002010 | IV36_GL000800 | Hypothetical protein. | Hypothetical protein. | 0.491 |
KRN26460.1 | KRN33068.1 | IV36_GL002010 | IV36_GL000801 | Hypothetical protein. | Transport protein. | 0.643 |
KRN26460.1 | KRN33071.1 | IV36_GL002010 | IV36_GL000804 | Hypothetical protein. | AraC-like transcriptional regulator. | 0.789 |
KRN26460.1 | rpoA | IV36_GL002010 | IV36_GL000643 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.546 |
KRN29831.1 | KRN26460.1 | IV36_GL000378 | IV36_GL002010 | AraC family transcriptional regulator. | Hypothetical protein. | 0.458 |
KRN29831.1 | KRN32067.1 | IV36_GL000378 | IV36_GL001318 | AraC family transcriptional regulator. | Glutamate synthase large subunit. | 0.859 |
KRN29831.1 | KRN33071.1 | IV36_GL000378 | IV36_GL000804 | AraC family transcriptional regulator. | AraC-like transcriptional regulator. | 0.431 |
KRN29831.1 | rpoA | IV36_GL000378 | IV36_GL000643 | AraC family transcriptional regulator. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.546 |
KRN30004.1 | KRN26460.1 | IV36_GL000273 | IV36_GL002010 | AraC family transcriptional regulator. | Hypothetical protein. | 0.677 |
KRN30004.1 | KRN32067.1 | IV36_GL000273 | IV36_GL001318 | AraC family transcriptional regulator. | Glutamate synthase large subunit. | 0.859 |
KRN30004.1 | KRN33071.1 | IV36_GL000273 | IV36_GL000804 | AraC family transcriptional regulator. | AraC-like transcriptional regulator. | 0.776 |
KRN30004.1 | rpoA | IV36_GL000273 | IV36_GL000643 | AraC family transcriptional regulator. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.546 |
KRN32067.1 | KRN26460.1 | IV36_GL001318 | IV36_GL002010 | Glutamate synthase large subunit. | Hypothetical protein. | 0.859 |
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