STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN30762.1Glycosyl transferase, group 1. (366 aa)    
Predicted Functional Partners:
KRN27037.1
UDP-galactopyranose mutase.
  
 
 0.594
KRN33046.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.592
KRN33048.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.544
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 
 0.504
KRN27125.1
Glycosyltransferase.
 
  
 0.494
KRN26772.1
Transcription regulator.
  
  
  0.490
KRN30681.1
GNAT family acetyltransferase.
  
     0.489
KRN28551.1
Alpha beta fold family hydrolase.
    
 
 0.472
KRN33167.1
Cell surface hydrolase, membrane-bound.
    
 
 0.472
KRN27036.1
Nucleotide sugar dehydrogenase.
  
  
 0.449
Your Current Organism:
Lactobacillus mali
NCBI taxonomy Id: 1618
Other names: ATCC 27053, ATCC 27304 [[Lactobacillus yamanashiensis subsp. yamanashiensis]], CCUG 30141, CCUG 32228, CIP 103142, DSM 20444, KCTC 3596, L. mali, LMG 6899, LMG:6899, Lactobacillus yamanashiensis, Lactobacillus yamanashiensis subsp. mali, Lactobacillus yamanashiensis subsp. yamanashiensis, NBRC 102159, NCIB 10560, NCIB:10560, NCIMB 10560, NRRL B-4563
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